Search Genes/Transcripts by Id/Name

Chromosome	Strand	Start	End

QTL Id	QTL Name
QTL0003186	Empty body protein content
QTL0003187	Days to 105 kg
QTL0003207	Estimated carcass lean content
QTL0003266	Drip loss
QTL0003267	Carcass weight (hot)
QTL0003268	Body weight (slaughter)
QTL0003269	tenderness score
QTL0003270	Ham weight
QTL0003271	Shear force
QTL0003272	tenderness score
QTL0003309	Carcass temperature (24 hr post-mortem)
QTL0003315	Total body fat tissue (22 weeks of age)
QTL0003318	Empty body lipid content
QTL0003676	backfat at last rib
QTL0003677	average daily gain
QTL0003700	Carcass length
QTL0003701	Carcass weight (hot)
QTL0003702	pH for Longissmus Dorsi
QTL0003703	pH for Semimembranosus
QTL0004155	average daily gain
QTL0004156	Lean meat percentage
QTL0004157	pH for Longissmus Dorsi
QTL0004158	pH for Semimembranosus
QTL0004159	Conductivity 24 hours postmortem (ham)
QTL0004195	Conductivity 45 minutes post-mortem
QTL0004196	Conductivity 24 hours postmortem (ham)
QTL0004247	Body weight (slaughter)
QTL0004248	Carcass weight (hot)
QTL0005205	backfat above muscle dorsi
QTL0005213	backfat at mid-back
QTL0005246	backfat at mid-back
QTL0016931	body weight (22 weeks)
QTL0016932	Empty body lipid content
QTL0016933	body weight (19 weeks)
QTL0021396	Ham weight

Query species	Query id	Query length	Subject species	Subject id	Subject length	Identity	Alignment length	E-value	Similarity
Sus scrofa	linc-ssct6048	1519	Sus scrofa	ALDBSSCT0000011043	1519	100.00	1519	0.0	Identical

Note: We blast these transcripts/genes against that of other species using NCBI Blastn with the parameters: -task megablast -evalue 1e-10 -max_target_seqs 100.
(i) Identical entries. These are entries with identical sequences and genomic locations.
(ii) Similar entries. These are entries with similar sequence information (query coverage>80%, subject coverage>80%, identity>0.8, e-value<1e-10).