PigVar contains the following data sets

1. GATK SNP files

2. Samtools mpileup SNP files

3. Phased SNP files

4. SV files
3. Phased SNP files
All these data can be downloaded from our server freely. Please use the following tools to do downloading since the data files are rather big.
Under linux environment:you may use wget, for example:
   wget ftp://www.ibiomedical.net/pub/pigvar/beagled_chr1.vcf.gz
Under windows environment: you may use FTP tool, (e.g.FileZilla):
    host: www.ibiomedical.net
    username: anonymous
    password: anonymous
   After you connect to the host successfully, change to the path /pub/pigvar/
   Please feel free to contact us if you encounter any problem.
File name File size Last modify time
beagled_chr1.vcf.gz470 MB Jun 22, 2015, 11:28
beagled_chr2.vcf.gz316 MB Jun 22, 2015, 11:34
beagled_chr3.vcf.gz310 MB Jun 22, 2015, 11:40
beagled_chr4.vcf.gz296 MB Jun 22, 2015, 11:46
beagled_chr5.vcf.gz248 MB Jun 22, 2015, 11:51
beagled_chr6.vcf.gz324 MB Jun 22, 2015, 11:57
beagled_chr7.vcf.gz312 MB Jun 22, 2015, 12:03
beagled_chr8.vcf.gz290 MB Jun 22, 2015, 12:09
beagled_chr9.vcf.gz319 MB Jun 22, 2015, 12:18
beagled_chr10.vcf.gz215 MB Jun 22, 2015, 10:48
beagled_chr11.vcf.gz210 MB Jun 22, 2015, 10:52
beagled_chr12.vcf.gz179 MB Jun 23, 2015, 11:10
beagled_chr13.vcf.gz353 MB Jun 22, 2015, 10:59
beagled_chr14.vcf.gz306 MB Jun 22, 2015, 11:05
beagled_chr15.vcf.gz284 MB Jun 22, 2015, 11:11
beagled_chr16.vcf.gz184 MB Jun 22, 2015, 11:15
beagled_chr17.vcf.gz179 MB Jun 22, 2015, 11:18
beagled_chr18.vcf.gz158 MB Jun 23, 2015, 12:05