SNP Detail For rs999943
1.Mapping Information
Human SNP ID rs999943
Human chromosome chr6
Human SNP position 33656956
Pig chromosome chr7
Pig SNP position 34471986
2.Annotation Information
PubMed ID19553259
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19553259
StudyCommon body mass index-associated variants confer risk of extreme obesity.
Disease/TraitObesity (extreme)
Initial sample775 European ancestry cases, 3,197 European ancestry controls
Replication sampleNA
Region6p21.31
Chromosome idchr6
Chromosome position33656956
Reported geneITPR3
Mapped geneITPR3
Upstream gene id
Downstream gene id
SNP gene ids3710
Upstream gene distance
Downstream gene distance
SNP risk allelers999943-T
SNPsrs999943
Merged0
SNP id current999943
Contextintron_variant
Intergenic0
Allele frequency0.72
P value0.000001
Pvalue mlog6
P value text
Or beta1.37
%95 Ci[1.20-1.56]
PlatformIllumina [457251]
CNVN
Mapped traitobesity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001073
Study accessionGCST000426