SNP Detail For rs9980603
1.Mapping Information
Human SNP ID rs9980603
Human chromosome chr21
Human SNP position 40514656
Pig chromosome chr13
Pig SNP position 214223608
2.Annotation Information
PubMed ID24047446
JournalWorld J Biol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24047446
StudyGenome-wide association study of co-occurring anxiety in major depression.
Disease/TraitAnxiety in major depressive disorder
Initial sample1,080 European ancestry cases, 442 European ancestry controls
Replication sampleNA
Region21q22.2
Chromosome idchr21
Chromosome position40514656
Reported geneDSCAM
Mapped geneDSCAM
Upstream gene id
Downstream gene id
SNP gene ids1826
Upstream gene distance
Downstream gene distance
SNP risk allelers9980603-?
SNPsrs9980603
Merged0
SNP id current9980603
Contextintron_variant
Intergenic0
Allele frequency0.58
P value0.0000003
Pvalue mlog6.52287874528033
P value text(Dichotomous)
Or beta1.53
%95 Ci[NR]
PlatformIllumina [471581]
CNVN
Mapped traitunipolar depression, anxiety
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0005230
Study accessionGCST002202