Human SNP ID | rs9980603 |
---|---|
Human chromosome | chr21 |
Human SNP position | 40514656 |
Pig chromosome | chr13 |
Pig SNP position | 214223608 |
PubMed ID | 24047446 |
---|---|
Journal | World J Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/24047446 |
Study | Genome-wide association study of co-occurring anxiety in major depression. |
Disease/Trait | Anxiety in major depressive disorder |
Initial sample | 1,080 European ancestry cases, 442 European ancestry controls |
Replication sample | NA |
Region | 21q22.2 |
Chromosome id | chr21 |
Chromosome position | 40514656 |
Reported gene | DSCAM |
Mapped gene | DSCAM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1826 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9980603-? |
SNPs | rs9980603 |
Merged | 0 |
SNP id current | 9980603 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.58 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (Dichotomous) |
Or beta | 1.53 |
%95 Ci | [NR] |
Platform | Illumina [471581] |
CNV | N |
Mapped trait | unipolar depression, anxiety |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0005230 |
Study accession | GCST002202 |