Human SNP ID | rs9976946 |
---|---|
Human chromosome | chr21 |
Human SNP position | 34835765 |
Pig chromosome | chr13 |
Pig SNP position | 208247307 |
PubMed ID | 23551011 |
---|---|
Journal | Ann Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23551011 |
Study | Genome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort. |
Disease/Trait | Preeclampsia |
Initial sample | 21 Afro-Caribbean cases, 1,010 Afro-Caribbean controls, 50 European ancestry cases, 1,202 European ancestry controls, 62 Hispanic cases, 658 Hispanic controls |
Replication sample | NA |
Region | 21q22.12 |
Chromosome id | chr21 |
Chromosome position | 34835765 |
Reported gene | RUNX1 |
Mapped gene | RUNX1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 861 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9976946-? |
SNPs | rs9976946 |
Merged | 0 |
SNP id current | 9976946 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (EA) |
Or beta | 5.5 |
%95 Ci | [2.65-11.39] |
Platform | Illumina [2485249] (imputed) |
CNV | N |
Mapped trait | preeclampsia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000668 |
Study accession | GCST001949 |