SNP Detail For rs9956738
1.Mapping Information
Human SNP ID rs9956738
Human chromosome chr18
Human SNP position 52414603
Pig chromosome chr1
Pig SNP position 111967414
2.Annotation Information
PubMed ID25017104
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25017104
StudyGenome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease.
Disease/TraitEosinophilic esophagitis
Initial sample657 European ancestry cases, 9,296 European ancestry controls
Replication sampleNA
Region18q21.2
Chromosome idchr18
Chromosome position52414603
Reported geneNR
Mapped geneDCC
Upstream gene id
Downstream gene id
SNP gene ids1630
Upstream gene distance
Downstream gene distance
SNP risk allelers9956738-?
SNPsrs9956738
Merged0
SNP id current9956738
Contextintron_variant
Intergenic0
Allele frequency0.01
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta2.472
%95 Ci[NR]
PlatformIllumina [1468075]
CNVN
Mapped traiteosinophilic esophagitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004232
Study accessionGCST002527