SNP Detail For rs9951602
1.Mapping Information
Human SNP ID rs9951602
Human chromosome chr18
Human SNP position 78897779
Pig chromosome chr1
Pig SNP position 162004304
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region18q23
Chromosome idchr18
Chromosome position78897779
Reported geneintergenic
Mapped geneLOC105372223 - LOC105372224
Upstream gene id105372223
Downstream gene id105372224
SNP gene ids
Upstream gene distance78868
Downstream gene distance10833
SNP risk allelers9951602-A
SNPsrs9951602
Merged0
SNP id current9951602
Contextintergenic_variant
Intergenic1
Allele frequency0.189
P value0.000009
Pvalue mlog5.04575749056067
P value text(IGF1 bound )
Or beta0.03
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitIGF-1 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004627
Study accessionGCST001762