Human SNP ID | rs9951602 |
---|---|
Human chromosome | chr18 |
Human SNP position | 78897779 |
Pig chromosome | chr1 |
Pig SNP position | 162004304 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 18q23 |
Chromosome id | chr18 |
Chromosome position | 78897779 |
Reported gene | intergenic |
Mapped gene | LOC105372223 - LOC105372224 |
Upstream gene id | 105372223 |
Downstream gene id | 105372224 |
SNP gene ids | |
Upstream gene distance | 78868 |
Downstream gene distance | 10833 |
SNP risk allele | rs9951602-A |
SNPs | rs9951602 |
Merged | 0 |
SNP id current | 9951602 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.189 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (IGF1 bound ) |
Or beta | 0.03 |
%95 Ci | [NR] ng/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | IGF-1 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004627 |
Study accession | GCST001762 |