Human SNP ID | rs9947662 |
---|---|
Human chromosome | chr18 |
Human SNP position | 47333893 |
Pig chromosome | chr1 |
Pig SNP position | 309388463 |
PubMed ID | 23793025 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23793025 |
Study | Genome-wide meta-analysis identifies new susceptibility loci for migraine. |
Disease/Trait | Migraine |
Initial sample | 23,285 European ancestry cases, 95,425 European ancestry controls |
Replication sample | NA |
Region | 18q21.1 |
Chromosome id | chr18 |
Chromosome position | 47333893 |
Reported gene | intergenic |
Mapped gene | SKOR2 - MIR4527 |
Upstream gene id | 652991 |
Downstream gene id | 100616264 |
SNP gene ids | |
Upstream gene distance | 84263 |
Downstream gene distance | 46603 |
SNP risk allele | rs9947662-? |
SNPs | rs9947662 |
Merged | 0 |
SNP id current | 9947662 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.73 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.06 |
%95 Ci | [1.03-1.09] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST002081 |