SNP Detail For rs9947662
1.Mapping Information
Human SNP ID rs9947662
Human chromosome chr18
Human SNP position 47333893
Pig chromosome chr1
Pig SNP position 309388463
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine
Initial sample23,285 European ancestry cases, 95,425 European ancestry controls
Replication sampleNA
Region18q21.1
Chromosome idchr18
Chromosome position47333893
Reported geneintergenic
Mapped geneSKOR2 - MIR4527
Upstream gene id652991
Downstream gene id100616264
SNP gene ids
Upstream gene distance84263
Downstream gene distance46603
SNP risk allelers9947662-?
SNPsrs9947662
Merged0
SNP id current9947662
Contextintron_variant
Intergenic1
Allele frequency0.73
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.06
%95 Ci[1.03-1.09]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002081