SNP Detail For rs9947276
1.Mapping Information
Human SNP ID rs9947276
Human chromosome chr18
Human SNP position 74780733
Pig chromosome chr1
Pig SNP position 165464227
2.Annotation Information
PubMed ID24962325
JournalDrug Alcohol Depend
Linkwww.ncbi.nlm.nih.gov/pubmed/24962325
StudyGenome-wide survival analysis of age at onset of alcohol dependence in extended high-risk COGA families.
Disease/TraitAlcohol dependence (age at onset)
Initial sample685 European ancestry cases, 1,103 European ancestry controls from 118 families
Replication sampleNA
Region18q22.3
Chromosome idchr18
Chromosome position74780733
Reported geneNR
Mapped geneZNF407
Upstream gene id
Downstream gene id
SNP gene ids55628
Upstream gene distance
Downstream gene distance
SNP risk allelers9947276-T
SNPsrs9947276
Merged0
SNP id current9947276
Contextintron_variant
Intergenic0
Allele frequency0.72
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.39
%95 Ci[1.25-1.53]
PlatformIllumina [4058415] (imputed)
CNVN
Mapped traitage at onset, alcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004847, http://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST002477