Human SNP ID | rs9942541 |
---|---|
Human chromosome | chr6 |
Human SNP position | 39156906 |
Pig chromosome | chr7 |
Pig SNP position | 39674051 |
PubMed ID | 24564958 |
---|---|
Journal | Mol Autism |
Link | www.ncbi.nlm.nih.gov/pubmed/24564958 |
Study | Variability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence. |
Disease/Trait | Social communication problems |
Initial sample | Up to 5,628 European ancestry individuals |
Replication sample | NA |
Region | 6p21.2 |
Chromosome id | chr6 |
Chromosome position | 39156906 |
Reported gene | KCNK5 |
Mapped gene | SAYSD1 - KCNK5 |
Upstream gene id | 55776 |
Downstream gene id | 8645 |
SNP gene ids | |
Upstream gene distance | 41720 |
Downstream gene distance | 32065 |
SNP risk allele | rs9942541-T |
SNPs | rs9942541 |
Merged | 0 |
SNP id current | 9942541 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Age 8) |
Or beta | 0.23 |
%95 Ci | [0.13-0.33] unit increase |
Platform | Illumina [2293137] (imputed) |
CNV | N |
Mapped trait | social communication impairment |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005427 |
Study accession | GCST002367 |