SNP Detail For rs9942436
1.Mapping Information
Human SNP ID rs9942436
Human chromosome chr6
Human SNP position 113320019
Pig chromosome chr1
Pig SNP position 89295310
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (arachidonic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position113320019
Reported geneNR
Mapped geneLOC105377953 - LOC105377957
Upstream gene id105377953
Downstream gene id105377957
SNP gene ids
Upstream gene distance122479
Downstream gene distance104343
SNP risk allelers9942436-T
SNPsrs9942436
Merged
SNP id current9942436
Contextintergenic_variant
Intergenic1
Allele frequency0.3643
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.0412
%95 Ci[0.023-0.059] unit decrease
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped traitarachidonic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006808
Study accessionGCST003236