Human SNP ID | rs9942436 |
---|---|
Human chromosome | chr6 |
Human SNP position | 113320019 |
Pig chromosome | chr1 |
Pig SNP position | 89295310 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-6 polyunsaturated fatty acid levels (arachidonic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 6q21 |
Chromosome id | chr6 |
Chromosome position | 113320019 |
Reported gene | NR |
Mapped gene | LOC105377953 - LOC105377957 |
Upstream gene id | 105377953 |
Downstream gene id | 105377957 |
SNP gene ids | |
Upstream gene distance | 122479 |
Downstream gene distance | 104343 |
SNP risk allele | rs9942436-T |
SNPs | rs9942436 |
Merged | |
SNP id current | 9942436 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.3643 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.0412 |
%95 Ci | [0.023-0.059] unit decrease |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | arachidonic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006808 |
Study accession | GCST003236 |