SNP Detail For rs9939760
1.Mapping Information
Human SNP ID rs9939760
Human chromosome chr16
Human SNP position 83619297
Pig chromosome chr6
Pig SNP position 5349686
2.Annotation Information
PubMed ID24665060
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24665060
StudyGenome-wide association study of smoking behaviours among Bangladeshi adults.
Disease/TraitSmoking initiation
Initial sample754 Bangladeshi ancestry never smoker males, 2,565 Bangladeshi ancestry never smoker females, 1,837 Bangladeshi ancestry ever smoker males, 198 Bangladeshi ancestry ever smoker females
Replication sampleNA
Region16q23.3
Chromosome idchr16
Chromosome position83619297
Reported geneNR
Mapped geneCDH13
Upstream gene id
Downstream gene id
SNP gene ids1012
Upstream gene distance
Downstream gene distance
SNP risk allelers9939760-?
SNPsrs9939760
Merged0
SNP id current9939760
Contextintron_variant
Intergenic0
Allele frequency
P value0.000009
Pvalue mlog5.04575749056067
P value text(females)
Or beta
%95 Ci
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitsmoking initiation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005670
Study accessionGCST002396