SNP Detail For rs9928486
1.Mapping Information
Human SNP ID rs9928486
Human chromosome chr16
Human SNP position 24076855
Pig chromosome chr3
Pig SNP position 23095124
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region16p12.2
Chromosome idchr16
Chromosome position24076855
Reported genePRKCB
Mapped genePRKCB
Upstream gene id
Downstream gene id
SNP gene ids5579
Upstream gene distance
Downstream gene distance
SNP risk allelers9928486-C
SNPsrs9928486
Merged0
SNP id current9928486
Contextintron_variant
Intergenic0
Allele frequency0.96
P value0.000001
Pvalue mlog6
P value text(AA)
Or beta0.082
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265