SNP Detail For rs9923770
1.Mapping Information
Human SNP ID rs9923770
Human chromosome chr16
Human SNP position 86106079
Pig chromosome chr6
Pig SNP position 3167760
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-3 polyunsaturated fatty acid levels (docosahexaenoic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region16q24.1
Chromosome idchr16
Chromosome position86106079
Reported geneNR
Mapped geneLOC105376778 - LINC01082
Upstream gene id105376778
Downstream gene id100506542
SNP gene ids
Upstream gene distance45873
Downstream gene distance90102
SNP risk allelers9923770-T
SNPsrs9923770
Merged
SNP id current9923770
Contextintergenic_variant
Intergenic1
Allele frequency0.5083
P value0.0000005
Pvalue mlog6.30102999566398
P value text
Or beta0.1038
%95 Ci[0.063-0.144] unit increase
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003240