Human SNP ID | rs9922516 |
---|---|
Human chromosome | chr16 |
Human SNP position | 17930993 |
Pig chromosome | chr3 |
Pig SNP position | 28558681 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 16p12.3 |
Chromosome id | chr16 |
Chromosome position | 17930993 |
Reported gene | intergenic |
Mapped gene | LOC105371107 - RPL7P47 |
Upstream gene id | 105371107 |
Downstream gene id | 146110 |
SNP gene ids | |
Upstream gene distance | 99158 |
Downstream gene distance | 1724 |
SNP risk allele | rs9922516-G |
SNPs | rs9922516 |
Merged | 0 |
SNP id current | 9922516 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.006 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (ALT ) |
Or beta | 0.02 |
%95 Ci | [NR] U/L increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST001762 |