Human SNP ID | rs9921518 |
---|---|
Human chromosome | chr16 |
Human SNP position | 54460512 |
Pig chromosome | chr6 |
Pig SNP position | 28019850 |
PubMed ID | 21546767 |
---|---|
Journal | Am J Nephrol |
Link | www.ncbi.nlm.nih.gov/pubmed/21546767 |
Study | Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. |
Disease/Trait | Dialysis-related mortality |
Initial sample | 610 African American type 2 diabetes cases |
Replication sample | NA |
Region | 16q12.2 |
Chromosome id | chr16 |
Chromosome position | 54460512 |
Reported gene | IRX5, IRX3 |
Mapped gene | LOC105371272 - LOC105371273 |
Upstream gene id | 105371272 |
Downstream gene id | 105371273 |
SNP gene ids | |
Upstream gene distance | 85796 |
Downstream gene distance | 85216 |
SNP risk allele | rs9921518-? |
SNPs | rs9921518 |
Merged | 0 |
SNP id current | 9921518 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.28 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 2.11 |
%95 Ci | [1.52-2.93] |
Platform | Affymetrix [832357] |
CNV | N |
Mapped trait | chronic kidney disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003884 |
Study accession | GCST001066 |