Human SNP ID | rs9902403 |
---|---|
Human chromosome | chr17 |
Human SNP position | 2924664 |
Pig chromosome | chr12 |
Pig SNP position | 50697783 |
PubMed ID | 25574825 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25574825 |
Study | Genome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms. |
Disease/Trait | Inflammatory skin disease |
Initial sample | 2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls |
Replication sample | NA |
Region | 17p13.3 |
Chromosome id | chr17 |
Chromosome position | 2924664 |
Reported gene | RAP1GAP2 |
Mapped gene | RAP1GAP2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23108 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9902403-? |
SNPs | rs9902403 |
Merged | 0 |
SNP id current | 9902403 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Psoriasis) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 5200000] |
CNV | N |
Mapped trait | psoriasis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000676 |
Study accession | GCST002740 |