SNP Detail For rs9901756
1.Mapping Information
Human SNP ID rs9901756
Human chromosome chr17
Human SNP position 34137135
Pig chromosome chr12
Pig SNP position 42623890
2.Annotation Information
PubMed ID22493691
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22493691
StudyNovel associations for hypothyroidism include known autoimmune risk loci.
Disease/TraitHypothyroidism
Initial sample3,736 European ancestry cases, 35,546 European ancestry controls
Replication sampleNA
Region17q12
Chromosome idchr17
Chromosome position34137135
Reported geneCCL2, LOC100131744
Mapped geneASIC2
Upstream gene id
Downstream gene id
SNP gene ids40
Upstream gene distance
Downstream gene distance
SNP risk allelers9901756-A
SNPsrs9901756
Merged0
SNP id current9901756
Contextintron_variant
Intergenic0
Allele frequency0.893
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.21
%95 Ci[1.11-1.32]
PlatformIllumina [870065]
CNVN
Mapped traithypothyroidism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004705
Study accessionGCST001474