Human SNP ID | rs9901675 |
---|---|
Human chromosome | chr17 |
Human SNP position | 7581494 |
Pig chromosome | chr12 |
Pig SNP position | 55297199 |
PubMed ID | 22829776 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22829776 |
Study | A genome-wide association meta-analysis of circulating sex hormone-binding globulin reveals multiple Loci implicated in sex steroid hormone regulation. |
Disease/Trait | Sex hormone-binding globulin levels |
Initial sample | 21,791 European ancestry individuals |
Replication sample | 8,175 European ancestry individuals |
Region | 17p13.1 |
Chromosome id | chr17 |
Chromosome position | 7581494 |
Reported gene | SHBG |
Mapped gene | CD68 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 968 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9901675-A |
SNPs | rs9901675 |
Merged | 0 |
SNP id current | 9901675 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.05 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | (Men + Women, Conditional) |
Or beta | 0.057 |
%95 Ci | [0.037-0.077] unit decrease |
Platform | Affymetrix, Illumina [2543887] (imputed) |
CNV | N |
Mapped trait | sex hormone globulin binding measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004696 |
Study accession | GCST001612 |