SNP Detail For rs9901675
1.Mapping Information
Human SNP ID rs9901675
Human chromosome chr17
Human SNP position 7581494
Pig chromosome chr12
Pig SNP position 55297199
2.Annotation Information
PubMed ID22829776
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22829776
StudyA genome-wide association meta-analysis of circulating sex hormone-binding globulin reveals multiple Loci implicated in sex steroid hormone regulation.
Disease/TraitSex hormone-binding globulin levels
Initial sample21,791 European ancestry individuals
Replication sample8,175 European ancestry individuals
Region17p13.1
Chromosome idchr17
Chromosome position7581494
Reported geneSHBG
Mapped geneCD68
Upstream gene id
Downstream gene id
SNP gene ids968
Upstream gene distance
Downstream gene distance
SNP risk allelers9901675-A
SNPsrs9901675
Merged0
SNP id current9901675
Contextmissense_variant
Intergenic0
Allele frequency0.05
P value0.0000001
Pvalue mlog7
P value text(Men + Women, Conditional)
Or beta0.057
%95 Ci[0.037-0.077] unit decrease
PlatformAffymetrix, Illumina [2543887] (imputed)
CNVN
Mapped traitsex hormone globulin binding measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004696
Study accessionGCST001612