Human SNP ID | rs9899891 |
---|---|
Human chromosome | chr17 |
Human SNP position | 14726429 |
Pig chromosome | chr12 |
Pig SNP position | 61609857 |
PubMed ID | 22589738 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22589738 |
Study | Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. |
Disease/Trait | Visceral adipose tissue/subcutaneous adipose tissue ratio |
Initial sample | 5,560 European ancestry female individuals, 4,997 European ancestry male individuals |
Replication sample | NA |
Region | 17p12 |
Chromosome id | chr17 |
Chromosome position | 14726429 |
Reported gene | FLJ45831 |
Mapped gene | RPS18P12 - LOC105371545 |
Upstream gene id | 388339 |
Downstream gene id | 105371545 |
SNP gene ids | |
Upstream gene distance | 20853 |
Downstream gene distance | 73777 |
SNP risk allele | rs9899891-A |
SNPs | rs9899891 |
Merged | 0 |
SNP id current | 9899891 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.74 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (women) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | visceral:subcutaneous adipose tissue ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004767 |
Study accession | GCST001524 |