SNP Detail For rs9899891
1.Mapping Information
Human SNP ID rs9899891
Human chromosome chr17
Human SNP position 14726429
Pig chromosome chr12
Pig SNP position 61609857
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral adipose tissue/subcutaneous adipose tissue ratio
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region17p12
Chromosome idchr17
Chromosome position14726429
Reported geneFLJ45831
Mapped geneRPS18P12 - LOC105371545
Upstream gene id388339
Downstream gene id105371545
SNP gene ids
Upstream gene distance20853
Downstream gene distance73777
SNP risk allelers9899891-A
SNPsrs9899891
Merged0
SNP id current9899891
Contextintron_variant
Intergenic1
Allele frequency0.74
P value0.000004
Pvalue mlog5.39794000867203
P value text(women)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral:subcutaneous adipose tissue ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004767
Study accessionGCST001524