Human SNP ID | rs9898058 |
---|---|
Human chromosome | chr17 |
Human SNP position | 49741459 |
Pig chromosome | chr12 |
Pig SNP position | 25929563 |
PubMed ID | 25710614 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/25710614 |
Study | Genome-wide association study identifies peanut allergy-specific loci and evidence of epigenetic mediation in US children. |
Disease/Trait | Milk allergy |
Initial sample | 291 European ancestry child cases, 144 European ancestry non-allergic non-sensitized normal child controls, 614 European ancestry uncertain phenotype child controls, 1,148 European ancestry uncertain phenotype adult controls |
Replication sample | NA |
Region | 17q21.33 |
Chromosome id | chr17 |
Chromosome position | 49741459 |
Reported gene | FAM117A |
Mapped gene | FAM117A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 81558 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9898058-? |
SNPs | rs9898058 |
Merged | 0 |
SNP id current | 9898058 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [6459842] (imputed) |
CNV | N |
Mapped trait | milk allergy measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007019 |
Study accession | GCST002788 |