SNP Detail For rs9895585
1.Mapping Information
Human SNP ID rs9895585
Human chromosome chr17
Human SNP position 43987619
Pig chromosome chr12
Pig SNP position 19423830
2.Annotation Information
PubMed ID23006423
JournalBMC Cancer
Linkwww.ncbi.nlm.nih.gov/pubmed/23006423
StudyGenetic association with overall survival of taxane-treated lung cancer patients - A genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study.
Disease/TraitResponse to taxane treatment (placlitaxel)
Initial sample96 African American lymphoblastoid cell lines, 96 European ancestry lymphoblastoid cell lines, 96 Han Chinese ancestry lymphoblastoid cell lines
Replication sampleNA
Region17q21.31
Chromosome idchr17
Chromosome position43987619
Reported genePYY
Mapped genePYY
Upstream gene id
Downstream gene id
SNP gene ids5697
Upstream gene distance
Downstream gene distance
SNP risk allelers9895585-?
SNPsrs9895585
Merged0
SNP id current9895585
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 1300000]
CNVN
Mapped traitresponse to paclitaxel
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_1901555
Study accessionGCST001694