SNP Detail For rs9883949
1.Mapping Information
Human SNP ID rs9883949
Human chromosome chr3
Human SNP position 114452543
Pig chromosome chr13
Pig SNP position 155041639
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region3q13.31
Chromosome idchr3
Chromosome position114452543
Reported geneNR
Mapped geneZBTB20
Upstream gene id
Downstream gene id
SNP gene ids26137
Upstream gene distance
Downstream gene distance
SNP risk allelers9883949-C
SNPsrs9883949
Merged
SNP id current9883949
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.0869565
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048