SNP Detail For rs9883878
1.Mapping Information
Human SNP ID rs9883878
Human chromosome chr3
Human SNP position 178137844
Pig chromosome chr13
Pig SNP position 125489381
2.Annotation Information
PubMed ID23829686
JournalHum Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/23829686
StudyRank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations.
Disease/TraitAsthma (childhood onset)
Initial sample429 European ancestry affected offspring trios
Replication sample52 African American affected offspring trios, 46 Hispanic affected offspring trios
Region3q26.32
Chromosome idchr3
Chromosome position178137844
Reported geneintergenic
Mapped geneLOC105374234 - LOC105374235
Upstream gene id105374234
Downstream gene id105374235
SNP gene ids
Upstream gene distance71998
Downstream gene distance195284
SNP risk allelers9883878-?
SNPsrs9883878
Merged0
SNP id current9883878
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformAffymetrix [786195]
CNVN
Mapped traitchildhood onset asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004591
Study accessionGCST002088