Human SNP ID | rs9883204 |
---|---|
Human chromosome | chr3 |
Human SNP position | 123377973 |
Pig chromosome | chr13 |
Pig SNP position | 146480459 |
PubMed ID | 20372150 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20372150 |
Study | Variants in ADCY5 and near CCNL1 are associated with fetal growth and birth weight. |
Disease/Trait | Birth weight |
Initial sample | 10,623 European ancestry individuals |
Replication sample | 27,591 European ancestry individuals, 1,415 Filipino ancestry individuals, 746 North African ancestry individuals, 333 Turkish ancestry individuals |
Region | 3q21.1 |
Chromosome id | chr3 |
Chromosome position | 123377973 |
Reported gene | ADCY5 |
Mapped gene | ADCY5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 111 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9883204-C |
SNPs | rs9883204 |
Merged | 0 |
SNP id current | 9883204 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000000000000007 |
Pvalue mlog | 14.1549019599857 |
P value text | |
Or beta | 0.06 |
%95 Ci | [0.047-0.079] s.d. decrease |
Platform | Affymetrix, Illumina [~ 2400000] (imputed) |
CNV | N |
Mapped trait | birth weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004344 |
Study accession | GCST000648 |
PubMed ID | 23202124 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23202124 |
Study | New loci associated with birth weight identify genetic links between intrauterine growth and adult height and metabolism. |
Disease/Trait | Birth weight |
Initial sample | Up to 26,836 European ancestry individuals |
Replication sample | Up to 42,519 European ancestry individuals |
Region | 3q21.1 |
Chromosome id | chr3 |
Chromosome position | 123377973 |
Reported gene | ADCY5 |
Mapped gene | ADCY5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 111 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9883204-C |
SNPs | rs9883204 |
Merged | 0 |
SNP id current | 9883204 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.76 |
P value | 6E-20 |
Pvalue mlog | 19.2218487496163 |
P value text | |
Or beta | 0.059 |
%95 Ci | [0.047-0.071] gram decrease |
Platform | Affymetrix, Illumina [~ 2700000] (imputed) |
CNV | N |
Mapped trait | birth weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004344 |
Study accession | GCST001758 |