SNP Detail For rs9878522
1.Mapping Information
Human SNP ID rs9878522
Human chromosome chr3
Human SNP position 165407371
Pig chromosome chr13
Pig SNP position 113064098
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region3q26.1
Chromosome idchr3
Chromosome position165407371
Reported geneintergenic
Mapped geneLINC01322
Upstream gene id
Downstream gene id
SNP gene ids103695433
Upstream gene distance
Downstream gene distance
SNP risk allelers9878522-?
SNPsrs9878522
Merged0
SNP id current9878522
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text(SF3)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651