Human SNP ID | rs9854771 |
---|---|
Human chromosome | chr3 |
Human SNP position | 189790682 |
Pig chromosome | chr13 |
Pig SNP position | 136430537 |
PubMed ID | 26098869 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26098869 |
Study | Common variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer. |
Disease/Trait | Pancreatic cancer |
Initial sample | 7,638 cases, 7,364 controls |
Replication sample | 2,287 cases, 4,205 controls |
Region | 3q28 |
Chromosome id | chr3 |
Chromosome position | 189790682 |
Reported gene | TP63 |
Mapped gene | TP63 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8626 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9854771-G |
SNPs | rs9854771 |
Merged | |
SNP id current | 9854771 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.638 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 1.1235955 |
%95 Ci | [1.08-1.18] |
Platform | Illumina [866891] (imputed) |
CNV | N |
Mapped trait | pancreatic carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002618 |
Study accession | GCST002991 |