SNP Detail For rs9845942
1.Mapping Information
Human SNP ID rs9845942
Human chromosome chr3
Human SNP position 3523843
Pig chromosome chr13
Pig SNP position 66293377
2.Annotation Information
PubMed ID26433762
JournalJ Affect Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/26433762
StudyA genome-wide association study of bipolar disorder with comorbid eating disorder replicates the SOX2-OT region.
Disease/TraitEating disorder in bipolar disorder
Initial sample184 European ancestry cases, 2,006 European ancestry controls
Replication sampleNA
Region3p26.2
Chromosome idchr3
Chromosome position3523843
Reported geneNR
Mapped geneLOC105376928 - LOC100130207
Upstream gene id105376928
Downstream gene id100130207
SNP gene ids
Upstream gene distance141193
Downstream gene distance160961
SNP risk allelers9845942-T
SNPsrs9845942
Merged
SNP id current9845942
Contextintron_variant
Intergenic1
Allele frequency0.27
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.68
%95 Ci[NR]
PlatformAffymetrix [703012]
CNVN
Mapped traiteating disorder, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005203, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST003132