Human SNP ID | rs9845942 |
---|---|
Human chromosome | chr3 |
Human SNP position | 3523843 |
Pig chromosome | chr13 |
Pig SNP position | 66293377 |
PubMed ID | 26433762 |
---|---|
Journal | J Affect Disord |
Link | www.ncbi.nlm.nih.gov/pubmed/26433762 |
Study | A genome-wide association study of bipolar disorder with comorbid eating disorder replicates the SOX2-OT region. |
Disease/Trait | Eating disorder in bipolar disorder |
Initial sample | 184 European ancestry cases, 2,006 European ancestry controls |
Replication sample | NA |
Region | 3p26.2 |
Chromosome id | chr3 |
Chromosome position | 3523843 |
Reported gene | NR |
Mapped gene | LOC105376928 - LOC100130207 |
Upstream gene id | 105376928 |
Downstream gene id | 100130207 |
SNP gene ids | |
Upstream gene distance | 141193 |
Downstream gene distance | 160961 |
SNP risk allele | rs9845942-T |
SNPs | rs9845942 |
Merged | |
SNP id current | 9845942 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.27 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.68 |
%95 Ci | [NR] |
Platform | Affymetrix [703012] |
CNV | N |
Mapped trait | eating disorder, bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005203, http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST003132 |