SNP Detail For rs9842133
1.Mapping Information
Human SNP ID rs9842133
Human chromosome chr3
Human SNP position 179946314
Pig chromosome chr13
Pig SNP position 127177000
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite levels
Initial sample7,824 European ancestry individuals
Replication sampleNA
Region3q26.33
Chromosome idchr3
Chromosome position179946314
Reported genePEX5L
Mapped genePEX5L
Upstream gene id
Downstream gene id
SNP gene ids51555
Upstream gene distance
Downstream gene distance
SNP risk allelers9842133-T
SNPsrs9842133
Merged0
SNP id current9842133
Contextintron_variant
Intergenic0
Allele frequency0.66
P value0.000000000004
Pvalue mlog11.397940008672
P value text(carnitine)
Or beta0.006
%95 Ci[0.004-0.008] unit increase
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002443