Human SNP ID | rs9836672 |
---|---|
Human chromosome | chr3 |
Human SNP position | 192195081 |
Pig chromosome | chr13 |
Pig SNP position | 138815491 |
PubMed ID | 23728906 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23728906 |
Study | A genome-wide association study of sleep habits and insomnia. |
Disease/Trait | Sleep quality |
Initial sample | 2,315 European ancestry individuals |
Replication sample | NA |
Region | 3q28 |
Chromosome id | chr3 |
Chromosome position | 192195081 |
Reported gene | FGF12 |
Mapped gene | FGF12 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2257 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9836672-T |
SNPs | rs9836672 |
Merged | 0 |
SNP id current | 9836672 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.05 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.27 |
%95 Ci | [0.15-0.39] unit increase |
Platform | Illumina [2380486] (imputed) |
CNV | N |
Mapped trait | sleep quality |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005272 |
Study accession | GCST002049 |