Human SNP ID | rs9835332 |
---|---|
Human chromosome | chr3 |
Human SNP position | 56633654 |
Pig chromosome | chr13 |
Pig SNP position | 42350238 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 3p14.3 |
Chromosome id | chr3 |
Chromosome position | 56633654 |
Reported gene | C3orf63 |
Mapped gene | FAM208A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23272 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9835332-C |
SNPs | rs9835332 |
Merged | 0 |
SNP id current | 9835332 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.46 |
P value | 0.0000000000005 |
Pvalue mlog | 12.3010299956639 |
P value text | |
Or beta | 0.026 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |
PubMed ID | 25282103 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25282103 |
Study | Defining the role of common variation in the genomic and biological architecture of adult human height. |
Disease/Trait | Height |
Initial sample | 253,288 European ancestry individuals |
Replication sample | 80,067 European ancestry individuals |
Region | 3p14.3 |
Chromosome id | chr3 |
Chromosome position | 56633654 |
Reported gene | C3orf63 |
Mapped gene | FAM208A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23272 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9835332-C |
SNPs | rs9835332 |
Merged | 0 |
SNP id current | 9835332 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.46 |
P value | 4E-22 |
Pvalue mlog | 21.397940008672 |
P value text | |
Or beta | 0.028 |
%95 Ci | [0.022-0.034] unit decrease |
Platform | Affymetrix, Illumina, Perlegen [2550858] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST002647 |