Human SNP ID | rs9821630 |
---|---|
Human chromosome | chr3 |
Human SNP position | 16929446 |
Pig chromosome | chr13 |
Pig SNP position | 4312602 |
PubMed ID | 21833088 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21833088 |
Study | Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 9,772 European ancestry cases, 16,849 European ancestry controls |
Replication sample | 4,218 European ancestry cases, 7,296 European ancestry controls |
Region | 3p24.3 |
Chromosome id | chr3 |
Chromosome position | 16929446 |
Reported gene | PLCL2 |
Mapped gene | PLCL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23228 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9821630-G |
SNPs | rs9821630 |
Merged | 0 |
SNP id current | 9821630 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.08 |
%95 Ci | [1.07-1.1] |
Platform | Illumina [465434] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001198 |