SNP Detail For rs9818941
1.Mapping Information
Human SNP ID rs9818941
Human chromosome chr3
Human SNP position 157968668
Pig chromosome chr13
Pig SNP position 105882038
2.Annotation Information
PubMed ID25429064
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25429064
StudyMeta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci.
Disease/TraitHeight
Initial sample36,227 East Asian ancestry individuals
Replication sample57,699 East Asian ancestry individuals
Region3q25.32
Chromosome idchr3
Chromosome position157968668
Reported geneSHOX2
Mapped genePQLC2L - SHOX2
Upstream gene id152078
Downstream gene id6474
SNP gene ids
Upstream gene distance290918
Downstream gene distance127343
SNP risk allelers9818941-A
SNPsrs9818941
Merged0
SNP id current9818941
Contextintergenic_variant
Intergenic1
Allele frequency0.45
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.028
%95 Ci[0.016-0.04] unit decrease
PlatformAffymetrix, Illumina [2704730] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002702