SNP Detail For rs981844
1.Mapping Information
Human SNP ID rs981844
Human chromosome chr4
Human SNP position 153730876
Pig chromosome chr8
Pig SNP position 79792165
2.Annotation Information
PubMed ID25350695
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/25350695
StudyPharmacogenetic meta-analysis of genome-wide association studies of LDL cholesterol response to statins.
Disease/TraitResponse to statins (LDL cholesterol change)
Initial sample18,596 European ancestry individuals
Replication sample23,279 European ancestry individuals
Region4q31.3
Chromosome idchr4
Chromosome position153730876
Reported geneRNF175
Mapped geneLOC105377499, RNF175
Upstream gene id
Downstream gene id
SNP gene ids105377499, 285533
Upstream gene distance
Downstream gene distance
SNP risk allelers981844-A
SNPsrs981844
Merged0
SNP id current981844
Contextintron_variant
Intergenic0
Allele frequency0.747
P value0.000001
Pvalue mlog6
P value text
Or beta0.009
%95 Ci[0.0051-0.0129] unit increase
PlatformAffymetrix, Illumina, Perlegen [at least 2500000] (imputed)
CNVN
Mapped traitresponse to statin, low density lipoprotein cholesterol measurement
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036273, http://www.ebi.ac.uk/efo/EFO_0004611
Study accessionGCST002675