SNP Detail For rs9813712
1.Mapping Information
Human SNP ID rs9813712
Human chromosome chr3
Human SNP position 130252258
Pig chromosome chr13
Pig SNP position 2072475
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region3q22.1
Chromosome idchr3
Chromosome position130252258
Reported geneintergenic
Mapped geneCOL6A4P2
Upstream gene id
Downstream gene id
SNP gene ids646300
Upstream gene distance
Downstream gene distance
SNP risk allelers9813712-?
SNPsrs9813712
Merged0
SNP id current9813712
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(SF1)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651