SNP Detail For rs9811423
1.Mapping Information
Human SNP ID rs9811423
Human chromosome chr3
Human SNP position 113103475
Pig chromosome chr13
Pig SNP position 156444479
2.Annotation Information
PubMed ID22005930
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22005930
StudyGenome-wide association study of Alzheimer__s disease with psychotic symptoms.
Disease/TraitPsychosis and Alzheimer__s disease
Initial sample1,039 European ancestry cases with psychosis, 5,659 European ancestry controls, 260 European, African American and Native American ancestry cases with psychosis from 264 families
Replication sampleNA
Region3q13.2
Chromosome idchr3
Chromosome position113103475
Reported geneRP11-572M11.4
Mapped geneC3orf17 - LOC101929717
Upstream gene id25871
Downstream gene id101929717
SNP gene ids
Upstream gene distance83624
Downstream gene distance38875
SNP risk allelers9811423-?
SNPsrs9811423
Merged0
SNP id current9811423
Contextintron_variant
Intergenic1
Allele frequency0.47
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.28
%95 Ci[NR]
PlatformIllumina [1847262] (imputed)
CNVN
Mapped traitAlzheimers disease, psychotic symptoms
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249, http://www.ebi.ac.uk/efo/EFO_0005940
Study accessionGCST001285