SNP Detail For rs9805786
1.Mapping Information
Human SNP ID rs9805786
Human chromosome chr13
Human SNP position 24084217
Pig chromosome chr11
Pig SNP position 2387360
2.Annotation Information
PubMed ID22064162
JournalPsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22064162
StudyGenome-wide association study of comorbid depressive syndrome and alcohol dependence.
Disease/TraitDepression and alcohol dependence
Initial sample467 European ancestry cases, 407 European ancestry controls
Replication sampleNA
Region13q12.12
Chromosome idchr13
Chromosome position24084217
Reported geneSPATA13
Mapped geneSPATA13
Upstream gene id
Downstream gene id
SNP gene ids221178
Upstream gene distance
Downstream gene distance
SNP risk allelers9805786-?
SNPsrs9805786
Merged0
SNP id current9805786
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.65
%95 Ci[1.33-2.05]
PlatformIllumina [876476]
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001313