Human SNP ID | rs9805786 |
---|---|
Human chromosome | chr13 |
Human SNP position | 24084217 |
Pig chromosome | chr11 |
Pig SNP position | 2387360 |
PubMed ID | 22064162 |
---|---|
Journal | Psychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22064162 |
Study | Genome-wide association study of comorbid depressive syndrome and alcohol dependence. |
Disease/Trait | Depression and alcohol dependence |
Initial sample | 467 European ancestry cases, 407 European ancestry controls |
Replication sample | NA |
Region | 13q12.12 |
Chromosome id | chr13 |
Chromosome position | 24084217 |
Reported gene | SPATA13 |
Mapped gene | SPATA13 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 221178 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9805786-? |
SNPs | rs9805786 |
Merged | 0 |
SNP id current | 9805786 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 1.65 |
%95 Ci | [1.33-2.05] |
Platform | Illumina [876476] |
CNV | N |
Mapped trait | alcohol dependence |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003829 |
Study accession | GCST001313 |