Human SNP ID | rs9792269 |
---|---|
Human chromosome | chr8 |
Human SNP position | 128252343 |
Pig chromosome | chr4 |
Pig SNP position | 12320558 |
PubMed ID | 20190752 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20190752 |
Study | Multiple common variants for celiac disease influencing immune gene expression. |
Disease/Trait | Celiac disease |
Initial sample | 4,533 European ancestry cases, 10,750 European ancestry controls |
Replication sample | 4,918 European ancestry cases, 5,684 European ancestry controls |
Region | 8q24.21 |
Chromosome id | chr8 |
Chromosome position | 128252343 |
Reported gene | intergenic |
Mapped gene | LOC105375755 - LINC00824 |
Upstream gene id | 105375755 |
Downstream gene id | 101927774 |
SNP gene ids | |
Upstream gene distance | 65597 |
Downstream gene distance | 152926 |
SNP risk allele | rs9792269-? |
SNPs | rs9792269 |
Merged | 0 |
SNP id current | 9792269 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.76 |
P value | 0.000000003 |
Pvalue mlog | 8.52287874528033 |
P value text | |
Or beta | 1.14 |
%95 Ci | [1.10-1.19] |
Platform | Illumina [292387] |
CNV | N |
Mapped trait | celiac disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001060 |
Study accession | GCST000612 |