SNP Detail For rs9783698
1.Mapping Information
Human SNP ID rs9783698
Human chromosome chr15
Human SNP position 74256432
Pig chromosome chr7
Pig SNP position 63897117
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region15q24.1
Chromosome idchr15
Chromosome position74256432
Reported geneCCDC33
Mapped geneCCDC33
Upstream gene id
Downstream gene id
SNP gene ids80125
Upstream gene distance
Downstream gene distance
SNP risk allelers9783698-A
SNPsrs9783698
Merged0
SNP id current9783698
Contextintron_variant
Intergenic0
Allele frequency0.15
P value0.000003
Pvalue mlog5.52287874528033
P value text(Urinary creatinine )
Or beta0.04
%95 Ci[NR] mmol/d increase
PlatformIllumina [899892]
CNVN
Mapped traiturinary metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005116
Study accessionGCST001762
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region15q24.1
Chromosome idchr15
Chromosome position74256432
Reported geneCCDC33
Mapped geneCCDC33
Upstream gene id
Downstream gene id
SNP gene ids80125
Upstream gene distance
Downstream gene distance
SNP risk allelers9783698-A
SNPsrs9783698
Merged0
SNP id current9783698
Contextintron_variant
Intergenic0
Allele frequency0.15
P value0.000001
Pvalue mlog6
P value text(Urinary free dopamine )
Or beta0.04
%95 Ci[NR] nmol/d increase
PlatformIllumina [899892]
CNVN
Mapped traiturinary metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005116
Study accessionGCST001762