SNP Detail For rs978152
1.Mapping Information
Human SNP ID rs978152
Human chromosome chr8
Human SNP position 132356847
Pig chromosome chr4
Pig SNP position 8812712
2.Annotation Information
PubMed ID23870195
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23870195
StudyGenetics of coronary artery calcification among African Americans, a meta-analysis.
Disease/TraitCoronary artery calcification
Initial sample5,823 African American individuals
Replication sample9,992 European ancestry individuals
Region8q24.22
Chromosome idchr8
Chromosome position132356847
Reported geneKCNQ3
Mapped geneKCNQ3
Upstream gene id
Downstream gene id
SNP gene ids3786
Upstream gene distance
Downstream gene distance
SNP risk allelers978152-C
SNPsrs978152
Merged0
SNP id current978152
Contextintron_variant
Intergenic0
Allele frequency0.25
P value0.000008
Pvalue mlog5.09691001300805
P value text(AA)
Or beta0.19
%95 Ci[0.11-0.27] unit increase
PlatformAffymetrix, Illumina [up to 2727966] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST002097