SNP Detail For rs977396
1.Mapping Information
Human SNP ID rs977396
Human chromosome chr8
Human SNP position 104980468
Pig chromosome chr4
Pig SNP position 35003098
2.Annotation Information
PubMed ID20195266
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/20195266
StudyGenomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs.
Disease/TraitResponse to antipsychotic treatment
Initial sample421 European ancestry, 214 African American, and 103 cases
Replication sampleNA
Region8q22.3
Chromosome idchr8
Chromosome position104980468
Reported geneintergenic
Mapped geneLOC105375694 - RPL29P18
Upstream gene id105375694
Downstream gene id644103
SNP gene ids
Upstream gene distance84751
Downstream gene distance30599
SNP risk allelers977396-?
SNPsrs977396
Merged0
SNP id current977396
Contextintron_variant
Intergenic1
Allele frequency0.089
P value0.0000003
Pvalue mlog6.52287874528033
P value text(olanzapine-total cholesterol)
Or beta
%95 Ci
PlatformAffymetrix [492900]
CNVN
Mapped traitresponse to olanzapine
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097333
Study accessionGCST000618