SNP Detail For rs9765602
1.Mapping Information
Human SNP ID rs9765602
Human chromosome chr5
Human SNP position 35426529
Pig chromosome chr16
Pig SNP position 21928224
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1 in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region5p13.2
Chromosome idchr5
Chromosome position35426529
Reported geneIntergenic
Mapped genePRLR - SPEF2
Upstream gene id5618
Downstream gene id79925
SNP gene ids
Upstream gene distance195940
Downstream gene distance191244
SNP risk allelers9765602-C
SNPsrs9765602
Merged0
SNP id current9765602
Contextupstream_gene_variant
Intergenic1
Allele frequency0.842
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.154
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST003263