Human SNP ID | rs975739 |
---|---|
Human chromosome | chr13 |
Human SNP position | 77807011 |
Pig chromosome | chr11 |
Pig SNP position | 54564162 |
PubMed ID | 23548203 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23548203 |
Study | Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans. |
Disease/Trait | Hair color |
Initial sample | 7,070 European ancestry individuals |
Replication sample | 4,155 European ancestry individuals |
Region | 13q22.3 |
Chromosome id | chr13 |
Chromosome position | 77807011 |
Reported gene | EDNRB |
Mapped gene | SLAIN1 - EDNRB-AS1 |
Upstream gene id | 122060 |
Downstream gene id | 100505518 |
SNP gene ids | |
Upstream gene distance | 42769 |
Downstream gene distance | 11926 |
SNP risk allele | rs975739-G |
SNPs | rs975739 |
Merged | 0 |
SNP id current | 975739 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000000000002 |
Pvalue mlog | 13.698970004336 |
P value text | |
Or beta | 0.08 |
%95 Ci | [0.060-0.100] unit increase |
Platform | Affymetrix, Illumina [7588169] (imputed) |
CNV | N |
Mapped trait | hair color |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003924 |
Study accession | GCST001932 |