Human SNP ID | rs975369 |
---|---|
Human chromosome | chr7 |
Human SNP position | 25573041 |
Pig chromosome | chr18 |
Pig SNP position | 51549956 |
PubMed ID | 23551011 |
---|---|
Journal | Ann Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23551011 |
Study | Genome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort. |
Disease/Trait | Preeclampsia |
Initial sample | 21 Afro-Caribbean cases, 1,010 Afro-Caribbean controls, 50 European ancestry cases, 1,202 European ancestry controls, 62 Hispanic cases, 658 Hispanic controls |
Replication sample | NA |
Region | 7p15.2 |
Chromosome id | chr7 |
Chromosome position | 25573041 |
Reported gene | NPVF |
Mapped gene | LOC105375196 - LOC646588 |
Upstream gene id | 105375196 |
Downstream gene id | 646588 |
SNP gene ids | |
Upstream gene distance | 76309 |
Downstream gene distance | 82168 |
SNP risk allele | rs975369-? |
SNPs | rs975369 |
Merged | 0 |
SNP id current | 975369 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (Afro-Caribbean) |
Or beta | 4.55 |
%95 Ci | [2.34-8.83] |
Platform | Illumina [2485249] (imputed) |
CNV | N |
Mapped trait | preeclampsia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000668 |
Study accession | GCST001949 |