SNP Detail For rs975369
1.Mapping Information
Human SNP ID rs975369
Human chromosome chr7
Human SNP position 25573041
Pig chromosome chr18
Pig SNP position 51549956
2.Annotation Information
PubMed ID23551011
JournalAnn Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23551011
StudyGenome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort.
Disease/TraitPreeclampsia
Initial sample21 Afro-Caribbean cases, 1,010 Afro-Caribbean controls, 50 European ancestry cases, 1,202 European ancestry controls, 62 Hispanic cases, 658 Hispanic controls
Replication sampleNA
Region7p15.2
Chromosome idchr7
Chromosome position25573041
Reported geneNPVF
Mapped geneLOC105375196 - LOC646588
Upstream gene id105375196
Downstream gene id646588
SNP gene ids
Upstream gene distance76309
Downstream gene distance82168
SNP risk allelers975369-?
SNPsrs975369
Merged0
SNP id current975369
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(Afro-Caribbean)
Or beta4.55
%95 Ci[2.34-8.83]
PlatformIllumina [2485249] (imputed)
CNVN
Mapped traitpreeclampsia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000668
Study accessionGCST001949