Human SNP ID | rs972540 |
---|---|
Human chromosome | chr2 |
Human SNP position | 206380059 |
Pig chromosome | chr15 |
Pig SNP position | 121195199 |
PubMed ID | 25673413 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 2q33.3 |
Chromosome id | chr2 |
Chromosome position | 206380059 |
Reported gene | ADAM23 |
Mapped gene | ZDBF2 - HNRNPA1P51 |
Upstream gene id | 57683 |
Downstream gene id | 729366 |
SNP gene ids | |
Upstream gene distance | 65621 |
Downstream gene distance | 38915 |
SNP risk allele | rs972540-G |
SNPs | rs972540 |
Merged | 0 |
SNP id current | 972540 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.269 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (EA) |
Or beta | 0.018 |
%95 Ci | [0.011-0.024] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 2q33.3 |
Chromosome id | chr2 |
Chromosome position | 206380059 |
Reported gene | ADAM23 |
Mapped gene | ZDBF2 - HNRNPA1P51 |
Upstream gene id | 57683 |
Downstream gene id | 729366 |
SNP gene ids | |
Upstream gene distance | 65621 |
Downstream gene distance | 38915 |
SNP risk allele | rs972540-G |
SNPs | rs972540 |
Merged | 0 |
SNP id current | 972540 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.266 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 0.017 |
%95 Ci | [0.01-0.023] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |