Human SNP ID | rs972275 |
---|---|
Human chromosome | chr6 |
Human SNP position | 127070699 |
Pig chromosome | chr1 |
Pig SNP position | 39842336 |
PubMed ID | 19084217 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19084217 |
Study | Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels. |
Disease/Trait | Iron status biomarkers |
Initial sample | 411 European ancestry individuals from 150 families |
Replication sample | NA |
Region | 6q22.33 |
Chromosome id | chr6 |
Chromosome position | 127070699 |
Reported gene | RSPO3 |
Mapped gene | LOC105377989 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105377989 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs972275-? |
SNPs | rs972275 |
Merged | 0 |
SNP id current | 972275 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (serum ferritin) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [100846] |
CNV | N |
Mapped trait | iron biomarker measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004461 |
Study accession | GCST000302 |