Human SNP ID | rs971768 |
---|---|
Human chromosome | chr22 |
Human SNP position | 17116572 |
Pig chromosome | chr5 |
Pig SNP position | 71783755 |
PubMed ID | 25130324 |
---|---|
Journal | Genes Brain Behav |
Link | www.ncbi.nlm.nih.gov/pubmed/25130324 |
Study | A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl__s gyrus. |
Disease/Trait | Heschl__s gyrus morphology |
Initial sample | 1,778 European ancestry individuals, 1,276 individuals |
Replication sample | NA |
Region | 22q11.1 |
Chromosome id | chr22 |
Chromosome position | 17116572 |
Reported gene | CECR6, IL17RA |
Mapped gene | CECR6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 27439 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs971768-A |
SNPs | rs971768 |
Merged | 0 |
SNP id current | 971768 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.07 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Right HG area) |
Or beta | 13.91 |
%95 Ci | unit increase |
Platform | Affymetrix, Illumina [4103035] (imputed) |
CNV | N |
Mapped trait | Heschl__s gyrus morphology measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005852 |
Study accession | GCST002579 |