SNP Detail For rs9693444
1.Mapping Information
Human SNP ID rs9693444
Human chromosome chr8
Human SNP position 29652100
Pig chromosome chr15
Pig SNP position 62667299
2.Annotation Information
PubMed ID23535729
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23535729
StudyLarge-scale genotyping identifies 41 new loci associated with breast cancer risk.
Disease/TraitBreast cancer
Initial sample10,052 European ancestry cases, 12,575 European ancestry controls
Replication sample45,290 European ancestry cases, 41,880 European ancestry controls
Region8p12
Chromosome idchr8
Chromosome position29652100
Reported geneintergenic
Mapped geneRPL17P33 - LOC105379353
Upstream gene id646909
Downstream gene id105379353
SNP gene ids
Upstream gene distance19417
Downstream gene distance15771
SNP risk allelers9693444-A
SNPsrs9693444
Merged0
SNP id current9693444
Contextintergenic_variant
Intergenic1
Allele frequency0.32
P value0.00000000000009
Pvalue mlog13.0457574905606
P value text
Or beta1.07
%95 Ci[1.05-1.09]
PlatformAffymetrix, Illumina [~ 2600000] (imputed)
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST001937