Human SNP ID | rs9693444 |
---|---|
Human chromosome | chr8 |
Human SNP position | 29652100 |
Pig chromosome | chr15 |
Pig SNP position | 62667299 |
PubMed ID | 23535729 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23535729 |
Study | Large-scale genotyping identifies 41 new loci associated with breast cancer risk. |
Disease/Trait | Breast cancer |
Initial sample | 10,052 European ancestry cases, 12,575 European ancestry controls |
Replication sample | 45,290 European ancestry cases, 41,880 European ancestry controls |
Region | 8p12 |
Chromosome id | chr8 |
Chromosome position | 29652100 |
Reported gene | intergenic |
Mapped gene | RPL17P33 - LOC105379353 |
Upstream gene id | 646909 |
Downstream gene id | 105379353 |
SNP gene ids | |
Upstream gene distance | 19417 |
Downstream gene distance | 15771 |
SNP risk allele | rs9693444-A |
SNPs | rs9693444 |
Merged | 0 |
SNP id current | 9693444 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.32 |
P value | 0.00000000000009 |
Pvalue mlog | 13.0457574905606 |
P value text | |
Or beta | 1.07 |
%95 Ci | [1.05-1.09] |
Platform | Affymetrix, Illumina [~ 2600000] (imputed) |
CNV | N |
Mapped trait | breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001937 |