Human SNP ID | rs9677476 |
---|---|
Human chromosome | chr2 |
Human SNP position | 231261577 |
Pig chromosome | chr15 |
Pig SNP position | 145708249 |
PubMed ID | 24962563 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/24962563 |
Study | Genome-wide genetic and transcriptomic investigation of variation in antibody response to dietary antigens. |
Disease/Trait | Food antigen IgG levels |
Initial sample | 1,367 Mexican Americans from 63 families |
Replication sample | NA |
Region | 2q37.1 |
Chromosome id | chr2 |
Chromosome position | 231261577 |
Reported gene | ARMC9 |
Mapped gene | ARMC9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 80210 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9677476-G |
SNPs | rs9677476 |
Merged | 0 |
SNP id current | 9677476 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.274 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (BSA-a) |
Or beta | 0.21 |
%95 Ci | [NR] unit increase |
Platform | Illumina [944565] (imputed) |
CNV | N |
Mapped trait | serum IgG measurement, response to dietary antigen |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004565, http://www.ebi.ac.uk/efo/EFO_0005844 |
Study accession | GCST002518 |