SNP Detail For rs9677476
1.Mapping Information
Human SNP ID rs9677476
Human chromosome chr2
Human SNP position 231261577
Pig chromosome chr15
Pig SNP position 145708249
2.Annotation Information
PubMed ID24962563
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/24962563
StudyGenome-wide genetic and transcriptomic investigation of variation in antibody response to dietary antigens.
Disease/TraitFood antigen IgG levels
Initial sample1,367 Mexican Americans from 63 families
Replication sampleNA
Region2q37.1
Chromosome idchr2
Chromosome position231261577
Reported geneARMC9
Mapped geneARMC9
Upstream gene id
Downstream gene id
SNP gene ids80210
Upstream gene distance
Downstream gene distance
SNP risk allelers9677476-G
SNPsrs9677476
Merged0
SNP id current9677476
Contextintron_variant
Intergenic0
Allele frequency0.274
P value0.000001
Pvalue mlog6
P value text(BSA-a)
Or beta0.21
%95 Ci[NR] unit increase
PlatformIllumina [944565] (imputed)
CNVN
Mapped traitserum IgG measurement, response to dietary antigen
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004565, http://www.ebi.ac.uk/efo/EFO_0005844
Study accessionGCST002518