SNP Detail For rs9677260
1.Mapping Information
Human SNP ID rs9677260
Human chromosome chr2
Human SNP position 196463011
Pig chromosome chr15
Pig SNP position 111369455
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region2q32.3
Chromosome idchr2
Chromosome position196463011
Reported geneNR
Mapped geneHECW2, LOC105373821
Upstream gene id
Downstream gene id
SNP gene ids57520, 105373821
Upstream gene distance
Downstream gene distance
SNP risk allelers9677260-T
SNPsrs9677260
Merged
SNP id current9677260
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta1.07
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048